Welcome to the NOAA Institutional Repository |
Stacks Logo
Advanced Search
Select up to three search categories and corresponding keywords using the fields to the right. Refer to the Help section for more detailed instructions.
 
 
Help
Clear All Simple Search
Advanced Search
Genetic evidence of a northward range expansion in the eastern Bering Sea stock of Pacific cod
  • Published Date:
    2019
  • Source:
    Evol Appl. 2020 Feb; 13(2): 362–375.
Filetype[PDF-2.44 MB]


Details:
  • Supporting Files:
    No Additional Files
    1. Methods for Image-based Surveys of Benthic Macroinvertebrates and Their Habitat Exemplified by the Drop Camera Survey for the Atlantic Sea Scallop
      Personal Author:
      Bethoney, N. David; Stokesbury, Kevin D. E.;
      Published Date:
      2018
      Source:
      J Vis Exp. 2018; (137): 57493.
      Description:
      Underwater imaging has long been used in the field of marine ecology but decreasing costs of high-resolution cameras and data storage have made the approach more practical than in the past. Image-based surveys allow for initial samples to be revisite...
      File Type:
      Filetype[PDF - 1.37 MB]
    2. Total mercury exposure in early pregnancy has no adverse association with scholastic ability of the offspring particularly if the mother eats fish
      Personal Author:
      Hibbeln, Joseph; Gregory, Steven; Iles-Caven, Yasmin; Taylor, Caroline M.; Emond, Alan; Golding, Jean;
      Published Date:
      2018
      Source:
      Environ Int. 2018 Jul; 116: 108–115.
      Description:
      There is a public perception that relatively low doses of mercury found in seafood are harmful to the fetal brain but little consistent evidence to support this. In earlier publications we have shown no adverse associations between maternal total blo...
      File Type:
      Filetype[PDF - 220.40 KB]
    3. Decadal evolution of the surface energy budget during the fast warming and global warming hiatus periods in the ERA-interim
      Personal Author:
      Hu, Xiaoming; Sejas, Sergio A.; Cai, Ming; Taylor, Patrick C.; Deng, Yi; Yang, Song;
      Published Date:
      2019
      Source:
      Clim Dyn. 2019 Feb; 52(3-4): 2005–2016.
      Description:
      The global-mean surface temperature has experienced a rapid warming from the 1980s to early-2000s but a muted warming since, referred to as the global warming hiatus in the literature. Decadal changes in deep ocean heat uptake are thought to primaril...
      File Type:
      Filetype[PDF - 1.98 MB]
    4. Adaptation Design Tool for Climate-Smart Management of Coral Reefs and Other Natural Resources
      Personal Author:
      West, Jordan M.; Courtney, Catherine A.; Hamilton, Anna T.; Parker, Britt A.; Gibbs, David A.; Bradley, Patricia; Julius, Susan H.;
      Published Date:
      2018
      Source:
      Environ Manage. 2018; 62(4): 644–664.
      Description:
      Scientists and managers of natural resources have recognized an urgent need for improved methods and tools to enable effective adaptation of management measures in the face of climate change. This paper presents an Adaptation Design Tool that uses a ...
      File Type:
      Filetype[PDF - 1.20 MB]
    5. Phylogenomics provides a robust topology of the major cnidarian lineages and insights on the origins of key organismal traits
      Personal Author:
      Kayal, Ehsan; Bentlage, Bastian; Pankey, M. Sabrina; Ohdera, Aki H.; Medina, Monica; Plachetzki, David C.; Collins, Allen G.; Ryan, Joseph F.;
      Published Date:
      2018
      Source:
      BMC Evolutionary Biology volume 18, Article number: 68 (2018)
      Description:
      The phylogeny of Cnidaria has been a source of debate for decades, during which nearly all-possible relationships among the major lineages have been proposed. The ecological success of Cnidaria is predicated on several fascinating organismal innovati...
      File Type:
      Filetype[PDF - 5.11 MB]
    6. Cassiosomes are stinging-cell structures in the mucus of the upside-down jellyfish Cassiopea xamachana
      Personal Author:
      Ames, Cheryl L.; Klompen, Anna M. L.; Badhiwala, Krishna; Muffett, Kade; Reft, Abigail J.; Kumar, Mehr; Janssen, Jennie D.; Schultzhaus, Janna N.; Field, Lauren D.; Muroski, Megan E.; Bezio, Nick; Robinson, Jacob T.; Leary, Dagmar H.; Cartwright, Paulyn; Collins, Allen G.; Vora, Gary J.;
      Published Date:
      2020
      Source:
      Commun Biol. 2020 Feb 13;3(1):67.
      Description:
      Snorkelers in mangrove forest waters inhabited by the upside-down jellyfish Cassiopea xamachana report discomfort due to a sensation known as stinging water, the cause of which is unknown. Using a combination of histology, microscopy, microfluidics, ...
      File Type:
      Filetype[PDF - 15.04 MB]
    7. Restoration‐mediated secondary contact leads to introgression of alewife ecotypes separated by a colonial‐era dam
      Personal Author:
      Reid, Kerry; Garza, John Carlos; Gephard, Steven R.; Caccone, Adalgisa; Post, David M.; Palkovacs, Eric P.;
      Published Date:
      2020
      Source:
      Evol Appl. 2020 Apr; 13(4): 652–664.
      Description:
      Secondary contact may have important implications for ecological and evolutionary processes; however, few studies have tracked the outcomes of secondary contact from its onset in natural ecosystems. We evaluated an anadromous alewife (Alosa pseudohar...
      File Type:
      Filetype[PDF - 794.81 KB]
    8. Model recommendations meet management reality: implementation and evaluation of a network-informed vaccination effort for endangered Hawaiian monk seals
      Personal Author:
      Robinson, Stacie J.; Barbieri, Michelle M.; Murphy, Samantha; Baker, Jason D.; Harting, Albert L.; Craft, Meggan E.; Littnan, Charles L.;
      Published Date:
      2018
      Source:
      Proc Biol Sci. 2018 Jan 10;285(1870):20171899.
      Description:
      Where disease threatens endangered wildlife populations, substantial resources are required for management actions such as vaccination. While network models provide a promising tool for identifying key spreaders and prioritizing efforts to maximize e...
      File Type:
      Filetype[PDF - 921.20 KB]
    9. Ancestry and adaptive evolution of anadromous, resident, and adfluvial rainbow trout (Oncorhynchus mykiss) in the San Francisco bay area: application of adaptive genomic variation to conservation in a highly impacted landscape
      Personal Author:
      Leitwein, Maeva; Garza, John Carlos; Pearse, Devon E.;
      Published Date:
      2016
      Source:
      Evol Appl. 2017 Jan; 10(1): 56–67.
      Description:
      The streams draining of into San Francisco Bay, California, have been impacted by habitat alteration for over 150 years, and roads, dams, water diversions, and other impediments now block the paths of many aquatic migratory species. These changes can...
      File Type:
      Filetype[PDF - 929.21 KB]
    10. Evaluation of NMME temperature and precipitation bias and forecast skill for South Asia
      Personal Author:
      Cash, Benjamin A.; Manganello, Julia V.; Kinter III, James L.;
      Published Date:
      2019
      Source:
      Clim Dyn. 2019; 53(12): 7363–7380.
      Description:
      Systematic error and forecast skill for temperature and precipitation in two regions of Southern Asia are investigated using hindcasts initialized May 1 from the North American Multi-Model Ensemble. We focus on two contiguous but geographically and d...
      File Type:
      Filetype[PDF - 10.33 MB]
    11. An Observational View of Relationships Between Moisture Aggregation, Cloud, and Radiative Heating Profiles
      Personal Author:
      Lebsock, Matthew D.; L’Ecuyer, Tristan S.; Pincus, Robert;
      Published Date:
      2017
      Source:
      Surv Geophys. 2017;38(6):1237-1254.
      Description:
      Data from several coincident satellite sensors are analyzed to determine the dependence of cloud and precipitation characteristics of tropical regions on the variance in the water vapor field. Increased vapor variance is associated with decreased hig...
      File Type:
      Filetype[PDF - 2.73 MB]
    12. Electrical conductivity of the global ocean
      Personal Author:
      Tyler, Robert H.; Boyer, Tim P.; Minami, Takuto; Zweng, Melissa M.; Reagan, James R.;
      Published Date:
      2017
      Description:
      The electrical conductivity of the ocean is a fundamental parameter in the electrodynamics of the Earth System. This parameter is involved in a number of applications ranging from the calibration of in situ ocean flow meters, through extensions of tr...
      File Type:
      Filetype[PDF - 1.68 MB]
    13. Genome‐wide SNPs resolve spatiotemporal patterns of connectivity within striped marlin (Kajikia audax), a broadly distributed and highly migratory pelagic species
      Personal Author:
      Mamoozadeh, Nadya R.; Graves, John E.; McDowell, Jan R.;
      Published Date:
      2020
      Source:
      Evol Appl. 2020 Apr; 13(4): 677–698.
      Description:
      Genomic methodologies offer unprecedented opportunities for statistically robust studies of species broadly distributed in environments conducive to high gene flow, providing valuable information for wildlife conservation and management. Here, we seq...
      File Type:
      Filetype[PDF - 1.94 MB]
    14. Precipitation Processes and Vortex Alignment during the Intensification of a Weak Tropical Cyclone in Moderate Vertical Shear
      Personal Author:
      Rogers, R. F.; Reasor, P.D.; Zawislak, J. A.; Nguyen, L.T.;
      Published Date:
      2020
      Source:
      Monthly Weather Review, 148 (5)
      Description:
      The mechanisms underlying the development of a deep, aligned vortex, and the role of convection and vertical shear in this process, are explored by examining airborne Doppler radar and deep-layer dropsonde observations of the intensification of Hurri...
      File Type:
      Filetype[PDF - 7.66 MB]
    15. Cumulative Sulfate Loads Shift Porewater to Sulfidic Conditions in Freshwater Wetland Sediment
      Personal Author:
      Johnson, Nathan W.; Pastor, John; Swain, Edward B.;
      Published Date:
      2019
      Source:
      Environ Toxicol Chem. 2019 Jun; 38(6): 1231–1244.
      Description:
      It is well established that sulfide can be toxic to rooted aquatic plants. However, a detailed description of the effects of cumulative sulfate loads on sulfide and iron (Fe) porewater geochemistry, plant exposure, and ecological response is lacking....
      File Type:
      Filetype[PDF - 723.28 KB]
    16. Surface Water CO2 variability in the Gulf of Mexico (1996–2017)
      Personal Author:
      Kealoha, A. K.; Shamberger, K. E.; DiMarco, S. F.; Thyng, K. M.; Hetland, R. D.; Manzello, D. P.; Slowey, N. C.; Enochs, I. C.;
      Published Date:
      2020
      Source:
      Scientific Reports, 10(1)
      Description:
      Approximately 380,000 underway measurements of sea surface salinity, temperature, and carbon dioxide (CO2) in the Gulf of Mexico (GoM) were compiled from the Surface Ocean CO2 Atlas (SOCAT) to provide a comprehensive observational analysis of spatiot...
      File Type:
      Filetype[PDF - 4.91 MB]
    17. Modeled changes to the Great Plains low‐level jet under a realistic irrigation application
      Personal Author:
      Arcand, S.; Luo, L.; Zhong, S.; Pei, L.; Bian, X.; Winkler, J.A.;
      Published Date:
      2019
      Source:
      Atmos Sci Lett. 2019 Mar; 20(3): e888.
      Description:
      Low‐level jets (LLJs) are relatively fast‐moving streams of air that form in the lower troposphere and are a common phenomenon across the Great Plains (GP) of the United States. LLJs play an important role in moisture transport and the developmen...
      File Type:
      Filetype[PDF - 1.87 MB]
    18. Hybridization between sympatric hammerhead sharks in the western North Atlantic Ocean
      Personal Author:
      Barker, Amanda M.; Adams, Douglas H.; Driggers, William B.; Frazier, Bryan S.; Portnoy, David S.;
      Published Date:
      2019
      Source:
      Biol Lett. 2019 Apr 26;15(4):20190004.
      Description:
      Hybridization between closely related species has been documented across a wide range of taxa but has not been well studied in elasmobranchs. Hammerhead sharks have drawn global conservation concern because they experience some of the highest mortali...
      File Type:
      Filetype[PDF - 428.16 KB]
    19. Changes in the use of a winter breeding area revealed by male humpback whale chorusing
      Personal Author:
      Lammers, M. O.; Kügler, A.; Zang, E.; Kaplan, M.; Mooney, T. A.;
      Published Date:
      2019
      Source:
      Proceedings of Meetings on Acoustics, 37(1)
      Description:
      Approximately half of the north Pacific humpback whale (Megaptera novaeangliae) population migrates from high latitude feeding grounds to Hawaii each winter and spring to breed. Beginning in 2015, unusually low numbers of whales began to be reported ...
      File Type:
      Filetype[PDF - 5.67 MB]
    20. Minimum Information about an Uncultivated Virus Genome (MIUViG)
      Personal Author:
      Roux, S.; Adriaenssens, E. M.; Dutilh, B. E.; Koonin, E. V.; Kropinski, A. M.; Krupovic, M.; Kuhn, J. H.; Lavigne, R.; Brister, J. R.; Varsani, A.; Amid, C.; Aziz, R. K.; Bordenstein, S. R.; Bork, P.; Breitbart, M.; Cochrane, G. R.; Daly, R. A.; Desnues, C.; Duhaime, M. B.; Emerson, J. B.; Enault, F.; Fuhrman, J. A.; Hingamp, P.; Hugenholtz, P.; Hurwitz, B. L.; Ivanova, N. N.; Labonte, J. M.; Lee, K. B.; Malmstrom, R. R.; Martinez-Garcia, M.; Mizrachi, I. K.; Ogata, H.; Paez-Espino, D.; Petit, M. A.; Putonti, C.; Rattei, T.; Reyes, A.; Rodriguez-Valera, F.; Rosario, K.; Schriml, L.; Schulz, F.; Steward, G. F.; Sullivan, M. B.; Sunagawa, S.; Suttle, C. A.; Temperton, B.; Tringe, S. G.; Thurber, R. V.; Webster, N. S.; Whiteson, K. L.; Wilhelm, S. W.; Wommack, K. E.; Woyke, T.; Wrighton, K. C.;
      Published Date:
      2019
      Source:
      Nat Biotechnol. 2019; 37(1): 29–37.
      Description:
      We present an extension of the Minimum Information about any (x) Sequence (MIxS) standard for reporting sequences of uncultivated virus genomes. Minimum Information about an Uncultivated Virus Genome (MIUViG) standards were developed within the Genom...
      File Type:
      Filetype[PDF - 906.46 KB]
You May Also Like:
  1. The GFDL Finite-Volume Cubed-Sphere Dynamical Core: Release 201912
    Personal Author:
    Harris, Lucas; Zhou, Linjiong; Chen, Xi; Chen, Jan-Huey;
    Corporate Authors:
    Geophysical Fluid Dynamics Laboratory (U.S.)
    Published Date:
    2020
    Series:
    NOAA technical memorandum OAR GFDL ; 2020-001
    Description:
    This technical note explains updates to the GFDL Finite-Volume Cubed-Sphere Dynamical Core, abbreviated FV3 or FV[superscript 3], and the Split GFDL Microphysics. It does not repeat the contents of earlier documentation, especially publications. A li...
    File Type:
    Filetype[PDF - 169.54 KB]
  2. Decision support tool to promote long-term survival of Acropora cervicornis on the Florida reef tract (NOAA Technical Report, OAR-AOML-53)
    Personal Author:
    van Hooidonk, Ruben J.
    Corporate Authors:
    United States. National Oceanic and Atmospheric Administration. Office of Oceanic and Atmospheric Research,. Atlantic Oceanographic and Meteorological Laboratory. United States, National Oceanic and Atmospheric Administration,. Coral Reef Conservation Program (U.S.). Cooperative Institute for Marine and Atmospheric Studies (Key Biscayne, Fla.).
    Published Date:
    2020
    Series:
    NOAA Technical Report OAR AOML ; 53
    Description:
    To maximize the long-term survival (>10 years) of nursery raised Acropora cervicornis corals, a map-based tool was created that ranks locations in the Florida Acropora Critical Habitat based on climate vulnerability. Climate vulnerability is defined ...
    File Type:
    Filetype[PDF - 2.46 MB]
  3. Uncertainty in the response of sudden stratospheric warmings and stratosphere-troposphere coupling to quadrupled CO2 concentrations in CMIP6 models
    Personal Author:
    Ayarzagüena, B.; Charlton-Perez, A. J.; Butler, A. H.; Hitchcock, P.; Simpson, I. R.; Polvani, L. M.; Butchart, N.; Gerber, E. P.; Gray, L.; Hassler, B.; Lin, P.; Lott, F.; Manzini, E.; Mizuta, R.; Orbe, C.; Osprey, S.; Saint-Martin, D.; Sigmond, M.; Taguchi, M.; Volodin, E. M.; Watanabe, S.;
    Published Date:
    2020
    Source:
    Journal of Geophysical Research: Atmospheres, 125(6)
    Description:
    Major sudden stratospheric warmings (SSWs), vortex formation, and final breakdown dates are key highlight points of the stratospheric polar vortex. These phenomena are relevant for stratosphere‐troposphere coupling, which explains the interest in u...
    File Type:
    Filetype[PDF - 19.25 MB]
  4. Turbid reefs moderate coral bleaching under climate‐related temperature stress
    Personal Author:
    Sully, Shannon; van Woesik, Robert;
    Published Date:
    2020
    Source:
    Glob Chang Biol. 2020 Mar; 26(3): 1367–1373.
    Description:
    Thermal‐stress events that cause coral bleaching and mortality have recently increased in frequency and severity. Yet few studies have explored conditions that moderate coral bleaching. Given that high light and high ocean temperature together caus...
    File Type:
    Filetype[PDF - 930.83 KB]
  5. Spatial Prioritization under Resilience Based Management : Evaluating Trade-offs among Prioritization Strategies
    Personal Author:
    Oliver, Thomas A.; Hospital, Justin; Brainard, Russell;
    Corporate Authors:
    United States. National Marine Fisheries Service,. Pacific Islands Fisheries Science Center (U.S.). United States, National Oceanic and Atmospheric Administration,. Coral Reef Conservation Program (U.S.).
    Published Date:
    2020
    Series:
    NOAA technical memorandum NMFS-PIFSC ; 105
    Description:
    Assessing ecological and social resilience to climate change stresses has become a priority in coral reef management worldwide, and there is increasing information on how to best incorporate these assessments into a novel management framework—resil...
    File Type:
    Filetype[PDF - 4.83 MB]