The recent decline in Lake Michigan productivity is often attributed to filter feeding by invasive quagga mussels, but some studies also implicate reductions in lakewide nutrient concentrations. We use a 3-D coupled hydrodynamic-biogeochemical model to evaluate the effect of changing nutrient concentrations and quagga mussel filtering on phytoplankton production and phytoplankton and zooplankton biomass. Sensitivity experiments are used to assess the net effect of each change separately and in unison. Quagga mussels are found to have the greatest impact during periods of isothermal mixing, while nutrients have the greatest impact during thermal stratification. Quagga mussels also act to enhance spatial heterogeneity, particularly between nearshore-offshore regions. This effect produces a reversal in the gradient of nearshore-offshore productivity: from relatively greater nearshore productivity in the prequagga lake to relatively lesser nearshore productivity after quaggas. The combined impact of both processes drives substantial reductions in phytoplankton and zooplankton biomass, as well as significant modifications to the seasonality of surface water pCO(2), particularly in nearshore regions where mussel grazing continues year-round. These results support growing concern that considerable losses of phytoplankton and zooplankton will yield concurrent losses at higher trophic levels. Comparisons to observed productivity suggest that both quagga mussel filtration and lower lakewide total phosphorus are necessary to accurately simulate recent changes in primary productivity in Lake Michigan.

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