Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa)

Ohdera, Aki; Ames, Cheryl L; Dikow, Rebecca B; Kayal, Ehsan; Chiodin, Marta; Busby, Ben; La, Sean; Pirro, Stacy; Collins, Allen G; Medina, Mónica; Ryan, Joseph F

doi:10.1093/gigascience/giz069

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Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa)

2019
By Ohdera, Aki ; Ames, Cheryl L ; Dikow, Rebecca B ; ...
Source: GigaScience, 8(7) 1-15

[PDF-2.01 MB]

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GigaScience
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Ohdera, Aki ; Ames, Cheryl L ; Dikow, Rebecca B ; Kayal, Ehsan ; Chiodin, Marta ; ... More +

Ohdera, Aki ; Ames, Cheryl L ; Dikow, Rebecca B ; Kayal, Ehsan ; Chiodin, Marta ; Busby, Ben ; La, Sean ; Pirro, Stacy ; Collins, Allen G ; Medina, Mónica ; Ryan, Joseph F Less -
NOAA Program & Office:

NMFS (National Marine Fisheries Service)
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Here we present 3 new draft genomes of Calvadosia cruxmelitensis (Staurozoa), Alatina alata (Cubozoa), and Cassiopea xamachana (Scyphozoa) for which we provide a preliminary orthology analysis that includes an inventory of their respective venom-related genes. Additionally, we identify synteny between POU and Hox genes that had previously been reported in a hydrozoan, suggesting this linkage is highly conserved, possibly dating back to at least the last common ancestor of Medusozoa, yet likely independent of vertebrate POU-Hox linkages.
Keywords:

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Genomics Jellyfishes Speciation staurozoa; scyphozoa; cubozoa; acraspeda; cnidaria; medusozoa
Source:

GigaScience, 8(7) 1-15
DOI:

https://doi.org/10.1093/gigascience/giz069
Pubmed Central ID:

PMC6599738
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Journal Article
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CC BY
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urn:sha256:5ca2e7ec81c4912b7145d870cd6862898ec93f4527cb757e4a9941b61d4fcfd0
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https://repository.library.noaa.gov/view/noaa/28561/noaa_28561_DS1.pdf
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Box, stalked, and upside-down? Draft genomes from diverse jellyfish (Cnidaria, Acraspeda) lineages: Alatina alata (Cubozoa), Calvadosia cruxmelitensis (Staurozoa), and Cassiopea xamachana (Scyphozoa)

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