Primer for archival tag data processing using R

Coutré, Karson Marie

doi:10.7289/V5/AFSC-PR-2017-01

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Primer for archival tag data processing using R

[PDF-365.49 KB]

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Personal Author:

Coutré, Karson Marie
Corporate Authors:

Alaska Fisheries Science Center (U.S.)
NOAA Program & Office:

NMFS (National Marine Fisheries Service) ; AFSC (Alaska Fisheries Science Center)

NMFS (National Marine Fisheries Service) ; AFSC (Alaska Fisheries Science Center) Less -
Description:

This report provides detailed steps for downloaded archival tag data processing in Microsoft Excel and R. Depth and temperature time series data from implanted archival tags in Greenland turbot (Reinhardtius hippoglossoides) are used as a case study. Steps outlined include formatting measurements and standardizing units and time zones. After initial error checking in Microsoft Excel, the procedures for importing, compiling, formatting, and saving data in R are described. Instructions and R code are provided to filter the data and calculate basic metrics. Code is provided to create and save data visualizations that aid in the understanding of the data, detecting patterns, and identifying errors. [doi:10.7289/V5/AFSC-PR-2017-01 (http://dx.doi.org/10.7289/V5/AFSC-PR-2017-01)]
Content Notes:

K. M. Coutré.

"January 2017."

System requirements: Adobe Acrobat Reader.

Includes bibliographical references (pages 17-18).
Keywords:

[+]

Databases Data Processing Fisheries Fishes Fish Stock Assessment Fish Tagging Monitoring Research
Series:

AFSC processed report ; 2017-01
DOI:

http://doi.org/10.7289/V5/AFSC-PR-2017-01
Document Type:

Technical Report
Place as Subject:

Alaska
Rights Information:

Public Domain
Compliance:

Library
Main Document Checksum:

[+]

urn:sha256:602cdbeb31b0bd6711c130df46d9d5477422bfa60b6b524ad3d8a4d778e8f577
Download URL:

https://repository.library.noaa.gov/view/noaa/13200/noaa_13200_DS1.pdf
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Primer for archival tag data processing using R

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